Department of Chemistry

Jane Clarke Publications (2004)


The folding of spectrin domains II: phi-value analysis of R16.
Scott KA, Randles LG, Clarke J
J Mol Biol, 2004, 1, 207-221. DOI: 10.1016/j.jmb.2004.09.023


The folding of spectrin domains I: wild-type domains have the same stability but very different kinetic properties.
Scott KA, Batey S, Hooton KA, Clarke J
J Mol Biol, 2004, 1, 195-205. DOI: 10.1016/j.jmb.2004.09.037


Comparison of the transition states for folding of two Ig-like proteins from different superfamilies.
Geierhaas CD, Paci E, Vendruscolo M, Clarke J
J Mol Biol, 2004, 4, 1111-1123. DOI: 10.1016/j.jmb.2004.08.100


Atomic force microscopy: mechanical unfolding of proteins.
Rounsevell R, Forman JR, Clarke J
Methods, 2004-09, 1, 100-111. DOI: 10.1016/j.ymeth.2004.03.007


The origin of protein sidechain order parameter distributions.
Best RB, Clarke J, Karplus M
J Am Chem Soc, 2004, 25, 7734-7735. DOI: 10.1021/ja049078w


The importance of loop length in the folding of an immunoglobulin domain.
Wright CF, Christodoulou J, Dobson CM, Clarke J
Protein Eng Des Sel, 2004-05, 5, 443-453. DOI: 10.1093/protein/gzh052


Thermodynamic characterisation of two transition states along parallel protein folding pathways.
Wright CF, Steward A, Clarke J
J Mol Biol, 2004, 3, 445-451. DOI: 10.1016/j.jmb.2004.02.062


Using dynamic force spectroscopy, protein engineering, structural studies and molecular dynamics simulations to investigate the effect of force on a protein unfolding landscape.
Clarke J
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2004, U476-U476.


Single molecule studies of protein folding by atomic force microscopy(AFM).
Ng S, Rounsevell R, Steward A, Randles L, Clarke J
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2004, U545-U545.


Hydrophobic core fluidity of homologous protein domains: relation of side-chain dynamics to core composition and packing.
Best RB, Rutherford TJ, Freund SM, Clarke J
Biochemistry, 2004, 5, 1145-1155. DOI: 10.1021/bi035658e


FnIII domains: Predicting mechanical stability
Rounsevell RWS, Clarke J
STRUCTURE, 2004-01, 1, 4-5. DOI: 10.1016/j.str.2003.12.006