Department of Chemistry

Daan Frenkel FRS Publications (2006)

Application of the optimized Baxter model to the hard-core attractive Yukawa system
Prinsen P, Pamies JC, Odijk T, Frenkel D
PERCUS-YEVICK APPROXIMATION, SPHERE MODEL, FLUIDS, SIMULATION, PRESSURE, ADHESION, CRYSTALS, EQUATION, ENTROPY, STATE 2006, 125, -. DOI: 10.1063/1.2390699

Materials science. Colloidal encounters: a matter of attraction.
Frenkel D
2006, 314, 768-769. DOI: 10.1126/science.1135544

Physical chemistry - Seeds of phase change
Frenkel D
NUCLEATION 2006, 443, 641-641. DOI: 10.1038/443641a

Forward flux sampling-type schemes for simulating rare events: efficiency analysis.
Allen RJ, Frenkel D, ten Wolde PR
2006, 124, 194111 -. DOI: 10.1063/1.2198827

Translocation boost protein-folding efficiency of double-barreled chaperonins.
Coluzza I, van der Vies SM, Frenkel D
Binding Sites, Chaperonin 10, Chaperonin 60, Computer Simulation, Models, Chemical, Models, Molecular, Molecular Chaperones, Protein Binding, Protein Conformation, Protein Folding, Protein Transport 2006, 90, 3375-3381. DOI: 10.1529/biophysj.105.074898

Designing ordered DNA-linked nanoparticle assemblies
Lukatsky DB, Mulder BM, Frenkel D
PHASE-TRANSITION, SURFACE 2006, 18, S567-S580.

Lattice-Boltzmann simulations of ionic current modulation by DNA translocation
Reboux S, Capuani F, Gonzalez-Segredo N, Frenkel D
DISSIPATIVE PARTICLE DYNAMICS, COUNTERION CONDENSATION, MOLECULAR-DYNAMICS, NANOPORE, POLYELECTROLYTES 2006, 2, 495-503. DOI: 10.1021/ct050340g

Lattice-Boltzmann simulation of the sedimentation of charged disks.
Capuani F, Pagonabarraga I, Frenkel D
Anisotropy, Chemistry, Physical, Computer Simulation, Electrochemistry, Friction, Kinetics, Models, Chemical, Models, Theoretical, Molecular Conformation, Static Electricity, Surface Properties 2006, 124, 124903 -. DOI: 10.1063/1.2178804

Effect of the coil-globule transition on the free-energy barrier for intrachain crystal nucleation.
Hu WB, Frenkel D
2006, 110, 3734-3737. DOI: 10.1021/jp056679g

Colloidal crystals: Plenty of room at the top
Frenkel D
SPHERES, SUPERLATTICE 2006, 5, 85-86. DOI: 10.1038/nmat1572

Simulating rare events in equilibrium or nonequilibrium stochastic systems.
Allen RJ, Frenkel D, ten Wolde PR
2006, 124, 024102 -. DOI: 10.1063/1.2140273

Waste-recycling Monte Carlo
Frenkel D
SIMULATIONS 2006, 703, 127-137. DOI: 10.1007/3-540-35273-2_4

Introduction to colloidal systems
Frenkel D
GAS-LIQUID NUCLEATION, PHASE-BEHAVIOR, COMPUTER-SIMULATION, PROTEIN CRYSTALLIZATION, POLYMER MIXTURES, HOMOGENEOUS NUCLEATION, POLAR-MOLECULES, HARD SPHERES, TRANSITION, MODEL 2006, 19-47.